Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN1P05114 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HMGN1P05114 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 AL357033.4-201ENST00000617703 1807 ntBASIC16.85■□□□□ 0.29
HMGN1P05114 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HMGN1P05114 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 KRT17P3-201ENST00000420566 1262 ntBASIC16.85■□□□□ 0.29
HMGN1P05114 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 MTDHP1-201ENST00000605323 784 ntBASIC16.85■□□□□ 0.29
HMGN1P05114 AC131212.4-201ENST00000623606 975 ntBASIC16.85■□□□□ 0.29
HMGN1P05114 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN1P05114 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN1P05114 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 AP000997.3-201ENST00000623333 2250 ntBASIC16.85■□□□□ 0.29
HMGN1P05114 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN1P05114 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HMGN1P05114 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 AC135776.1-201ENST00000319817 2481 ntBASIC16.85■□□□□ 0.29
HMGN1P05114 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN1P05114 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN1P05114 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGN1P05114 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGN1P05114 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HMGN1P05114 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGN1P05114 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGN1P05114 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGN1P05114 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.84■□□□□ 0.29
HMGN1P05114 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HMGN1P05114 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGN1P05114 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGN1P05114 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HMGN1P05114 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGN1P05114 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGN1P05114 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGN1P05114 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGN1P05114 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.29
HMGN1P05114 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGN1P05114 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGN1P05114 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGN1P05114 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGN1P05114 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 KRT16P5-201ENST00000455284 522 ntBASIC16.83■□□□□ 0.28
HMGN1P05114 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms