Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZBED1O96006 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.63■□□□□ 0.73
ZBED1O96006 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZBED1O96006 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZBED1O96006 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ZBED1O96006 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
ZBED1O96006 AP000523.1-201ENST00000398242 1049 ntBASIC19.63■□□□□ 0.73
ZBED1O96006 AC117947.1-201ENST00000427448 529 ntBASIC19.63■□□□□ 0.73
ZBED1O96006 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZBED1O96006 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.63■□□□□ 0.73
ZBED1O96006 AL031432.5-201ENST00000641059 760 ntBASIC19.63■□□□□ 0.73
ZBED1O96006 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZBED1O96006 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.63■□□□□ 0.73
ZBED1O96006 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.62■□□□□ 0.73
ZBED1O96006 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.62■□□□□ 0.73
ZBED1O96006 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.62■□□□□ 0.73
ZBED1O96006 MTMR9LP-203ENST00000426597 1545 ntBASIC19.62■□□□□ 0.73
ZBED1O96006 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ZBED1O96006 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.62■□□□□ 0.73
ZBED1O96006 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.62■□□□□ 0.73
ZBED1O96006 YBX1P2-201ENST00000489612 999 ntBASIC19.62■□□□□ 0.73
ZBED1O96006 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
ZBED1O96006 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.62■□□□□ 0.73
ZBED1O96006 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 AC140113.3-201ENST00000605663 199 ntBASIC19.62■□□□□ 0.73
ZBED1O96006 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZBED1O96006 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZBED1O96006 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 AL138781.2-201ENST00000617896 1843 ntBASIC19.62■□□□□ 0.73
ZBED1O96006 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.62■□□□□ 0.73
ZBED1O96006 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
ZBED1O96006 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZBED1O96006 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ZBED1O96006 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.61■□□□□ 0.73
ZBED1O96006 AL357033.4-201ENST00000617703 1807 ntBASIC19.61■□□□□ 0.73
ZBED1O96006 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.61■□□□□ 0.73
ZBED1O96006 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.61■□□□□ 0.73
ZBED1O96006 AK4P3-201ENST00000418260 669 ntBASIC19.61■□□□□ 0.73
ZBED1O96006 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
ZBED1O96006 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.61■□□□□ 0.73
ZBED1O96006 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.61■□□□□ 0.73
ZBED1O96006 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.61■□□□□ 0.73
ZBED1O96006 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.61■□□□□ 0.73
ZBED1O96006 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.61■□□□□ 0.73
ZBED1O96006 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.61■□□□□ 0.73
ZBED1O96006 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 AC011558.1-201ENST00000623459 338 ntBASIC19.61■□□□□ 0.73
ZBED1O96006 AL023973.1-201ENST00000624619 620 ntBASIC19.61■□□□□ 0.73
ZBED1O96006 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ZBED1O96006 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZBED1O96006 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.61■□□□□ 0.73
ZBED1O96006 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.61■□□□□ 0.73
ZBED1O96006 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZBED1O96006 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZBED1O96006 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.6■□□□□ 0.73
ZBED1O96006 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZBED1O96006 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.6■□□□□ 0.73
ZBED1O96006 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.6■□□□□ 0.73
ZBED1O96006 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZBED1O96006 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ZBED1O96006 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZBED1O96006 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms