Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.57■□□□□ 0.88
CLSTN1O94985 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.57■□□□□ 0.88
CLSTN1O94985 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLSTN1O94985 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.56■□□□□ 0.88
CLSTN1O94985 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLSTN1O94985 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLSTN1O94985 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLSTN1O94985 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.56■□□□□ 0.88
CLSTN1O94985 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLSTN1O94985 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.56■□□□□ 0.88
CLSTN1O94985 MIR1238-201ENST00000408483 83 ntBASIC20.56■□□□□ 0.88
CLSTN1O94985 AL390955.1-201ENST00000428694 934 ntBASIC20.56■□□□□ 0.88
CLSTN1O94985 TSPY23P-201ENST00000440136 739 ntBASIC20.56■□□□□ 0.88
CLSTN1O94985 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CLSTN1O94985 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.56■□□□□ 0.88
CLSTN1O94985 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CLSTN1O94985 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.56■□□□□ 0.88
CLSTN1O94985 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLSTN1O94985 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.56■□□□□ 0.88
CLSTN1O94985 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLSTN1O94985 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLSTN1O94985 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLSTN1O94985 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLSTN1O94985 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLSTN1O94985 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLSTN1O94985 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CLSTN1O94985 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
CLSTN1O94985 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CLSTN1O94985 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 MFAP1P1-201ENST00000442257 1255 ntBASIC20.55■□□□□ 0.88
CLSTN1O94985 RBM17P1-201ENST00000453646 1190 ntBASIC20.55■□□□□ 0.88
CLSTN1O94985 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.55■□□□□ 0.88
CLSTN1O94985 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLSTN1O94985 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.55■□□□□ 0.88
CLSTN1O94985 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.55■□□□□ 0.88
CLSTN1O94985 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.55■□□□□ 0.88
CLSTN1O94985 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.55■□□□□ 0.88
CLSTN1O94985 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.55■□□□□ 0.88
CLSTN1O94985 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLSTN1O94985 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLSTN1O94985 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLSTN1O94985 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 KRT8P11-201ENST00000409686 1436 ntBASIC20.54■□□□□ 0.88
CLSTN1O94985 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CLSTN1O94985 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 AC008040.2-201ENST00000461049 708 ntBASIC20.54■□□□□ 0.88
CLSTN1O94985 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.54■□□□□ 0.88
CLSTN1O94985 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CLSTN1O94985 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.54■□□□□ 0.88
CLSTN1O94985 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLSTN1O94985 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.54■□□□□ 0.88
CLSTN1O94985 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLSTN1O94985 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.53■□□□□ 0.88
CLSTN1O94985 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 IRX1P1-201ENST00000438849 1838 ntBASIC20.53■□□□□ 0.88
CLSTN1O94985 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms