Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM4BO94953 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.34■□□□□ 0.21
KDM4BO94953 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KDM4BO94953 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KDM4BO94953 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
KDM4BO94953 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
KDM4BO94953 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KDM4BO94953 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KDM4BO94953 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KDM4BO94953 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KDM4BO94953 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KDM4BO94953 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KDM4BO94953 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.33■□□□□ 0.2
KDM4BO94953 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.33■□□□□ 0.2
KDM4BO94953 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.33■□□□□ 0.2
KDM4BO94953 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KDM4BO94953 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.33■□□□□ 0.2
KDM4BO94953 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.33■□□□□ 0.2
KDM4BO94953 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.33■□□□□ 0.2
KDM4BO94953 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.33■□□□□ 0.2
KDM4BO94953 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 ABALON-201ENST00000629058 1903 ntBASIC16.33■□□□□ 0.2
KDM4BO94953 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.33■□□□□ 0.2
KDM4BO94953 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KDM4BO94953 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.33■□□□□ 0.2
KDM4BO94953 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KDM4BO94953 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
KDM4BO94953 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KDM4BO94953 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KDM4BO94953 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.32■□□□□ 0.2
KDM4BO94953 HLA-L-209ENST00000420110 1011 ntBASIC16.32■□□□□ 0.2
KDM4BO94953 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.32■□□□□ 0.2
KDM4BO94953 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.32■□□□□ 0.2
KDM4BO94953 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.32■□□□□ 0.2
KDM4BO94953 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.32■□□□□ 0.2
KDM4BO94953 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.32■□□□□ 0.2
KDM4BO94953 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.32■□□□□ 0.2
KDM4BO94953 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.32■□□□□ 0.2
KDM4BO94953 AC083906.6-201ENST00000641366 219 ntBASIC16.32■□□□□ 0.2
KDM4BO94953 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KDM4BO94953 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KDM4BO94953 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KDM4BO94953 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KDM4BO94953 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
KDM4BO94953 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
KDM4BO94953 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KDM4BO94953 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.31■□□□□ 0.2
KDM4BO94953 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM4BO94953 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM4BO94953 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 AC008403.3-201ENST00000598924 454 ntBASIC16.31■□□□□ 0.2
KDM4BO94953 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.31■□□□□ 0.2
KDM4BO94953 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 AC126763.1-201ENST00000552015 2118 ntBASIC16.31■□□□□ 0.2
KDM4BO94953 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.31■□□□□ 0.2
KDM4BO94953 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KDM4BO94953 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KDM4BO94953 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms