Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC24.6■■□□□ 1.53
LTN1O94822 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC24.6■■□□□ 1.53
LTN1O94822 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.6■■□□□ 1.53
LTN1O94822 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
LTN1O94822 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.6■■□□□ 1.53
LTN1O94822 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
LTN1O94822 TEX30-205ENST00000376029 959 ntTSL 2 BASIC24.59■■□□□ 1.53
LTN1O94822 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LTN1O94822 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
LTN1O94822 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
LTN1O94822 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC24.59■■□□□ 1.53
LTN1O94822 AC011840.4-201ENST00000578471 627 ntBASIC24.59■■□□□ 1.53
LTN1O94822 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
LTN1O94822 AC148477.8-201ENST00000624298 468 ntBASIC24.59■■□□□ 1.53
LTN1O94822 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
LTN1O94822 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 CCS-201ENST00000310190 942 ntTSL 5 BASIC24.59■■□□□ 1.53
LTN1O94822 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC24.59■■□□□ 1.53
LTN1O94822 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
LTN1O94822 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
LTN1O94822 KRT18P67-201ENST00000432816 1264 ntBASIC24.59■■□□□ 1.53
LTN1O94822 MINOS1P3-201ENST00000457048 203 ntBASIC24.59■■□□□ 1.53
LTN1O94822 AC079776.4-201ENST00000511039 504 ntBASIC24.59■■□□□ 1.53
LTN1O94822 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC24.59■■□□□ 1.53
LTN1O94822 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC24.59■■□□□ 1.53
LTN1O94822 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.59■■□□□ 1.53
LTN1O94822 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 BX640515.1-201ENST00000617215 977 ntBASIC24.59■■□□□ 1.53
LTN1O94822 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.59■■□□□ 1.53
LTN1O94822 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.59■■□□□ 1.53
LTN1O94822 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.59■■□□□ 1.53
LTN1O94822 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LTN1O94822 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LTN1O94822 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
LTN1O94822 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC24.58■■□□□ 1.53
LTN1O94822 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC24.58■■□□□ 1.53
LTN1O94822 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC24.58■■□□□ 1.53
LTN1O94822 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
LTN1O94822 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
LTN1O94822 PCDHAC2-203ENST00000615316 3011 ntBASIC24.58■■□□□ 1.53
LTN1O94822 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC24.58■■□□□ 1.53
LTN1O94822 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
LTN1O94822 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
LTN1O94822 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.58■■□□□ 1.52
LTN1O94822 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
LTN1O94822 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
LTN1O94822 AL163051.1-201ENST00000569214 1512 ntBASIC24.57■■□□□ 1.52
LTN1O94822 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LTN1O94822 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
LTN1O94822 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LTN1O94822 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.57■■□□□ 1.52
LTN1O94822 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LTN1O94822 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
LTN1O94822 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
LTN1O94822 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC24.57■■□□□ 1.52
LTN1O94822 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC24.57■■□□□ 1.52
LTN1O94822 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.57■■□□□ 1.52
LTN1O94822 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LTN1O94822 AC093484.2-201ENST00000580996 2166 ntBASIC24.57■■□□□ 1.52
LTN1O94822 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
LTN1O94822 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.57■■□□□ 1.52
LTN1O94822 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.57■■□□□ 1.52
LTN1O94822 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LTN1O94822 AL138831.2-201ENST00000606564 490 ntBASIC24.57■■□□□ 1.52
LTN1O94822 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.57■■□□□ 1.52
LTN1O94822 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LTN1O94822 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LTN1O94822 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
LTN1O94822 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.56■■□□□ 1.52
LTN1O94822 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
LTN1O94822 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LTN1O94822 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.56■■□□□ 1.52
LTN1O94822 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LTN1O94822 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms