Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP1O94782 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.83■□□□□ 0.6
USP1O94782 AC112777.1-201ENST00000540175 1423 ntBASIC18.83■□□□□ 0.6
USP1O94782 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP1O94782 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
USP1O94782 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 AL162741.1-201ENST00000565563 1558 ntBASIC18.82■□□□□ 0.6
USP1O94782 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.82■□□□□ 0.6
USP1O94782 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.82■□□□□ 0.6
USP1O94782 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.82■□□□□ 0.6
USP1O94782 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.82■□□□□ 0.6
USP1O94782 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.82■□□□□ 0.6
USP1O94782 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USP1O94782 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP1O94782 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
USP1O94782 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.81■□□□□ 0.6
USP1O94782 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.81■□□□□ 0.6
USP1O94782 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.81■□□□□ 0.6
USP1O94782 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.81■□□□□ 0.6
USP1O94782 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.81■□□□□ 0.6
USP1O94782 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.81■□□□□ 0.6
USP1O94782 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.81■□□□□ 0.6
USP1O94782 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 AC090340.1-201ENST00000620778 4980 ntBASIC18.81■□□□□ 0.6
USP1O94782 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.81■□□□□ 0.6
USP1O94782 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.81■□□□□ 0.6
USP1O94782 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
USP1O94782 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP1O94782 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.81■□□□□ 0.6
USP1O94782 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.8■□□□□ 0.6
USP1O94782 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.8■□□□□ 0.6
USP1O94782 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.8■□□□□ 0.6
USP1O94782 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 FAM197Y1-201ENST00000421178 764 ntBASIC18.8■□□□□ 0.6
USP1O94782 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.8■□□□□ 0.6
USP1O94782 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.8■□□□□ 0.6
USP1O94782 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.8■□□□□ 0.6
USP1O94782 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP1O94782 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.79■□□□□ 0.6
USP1O94782 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
USP1O94782 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP1O94782 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.79■□□□□ 0.6
USP1O94782 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP1O94782 ABALON-201ENST00000629058 1903 ntBASIC18.79■□□□□ 0.6
USP1O94782 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms