Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE3O75131 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE3O75131 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE3O75131 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CPNE3O75131 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE3O75131 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
CPNE3O75131 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE3O75131 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.83■□□□□ 0.44
CPNE3O75131 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE3O75131 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE3O75131 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CPNE3O75131 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 LINC01311-201ENST00000565162 1445 ntBASIC17.82■□□□□ 0.44
CPNE3O75131 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
CPNE3O75131 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE3O75131 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.82■□□□□ 0.44
CPNE3O75131 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE3O75131 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE3O75131 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CPNE3O75131 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.82■□□□□ 0.44
CPNE3O75131 AC083849.1-201ENST00000615227 514 ntBASIC17.82■□□□□ 0.44
CPNE3O75131 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CPNE3O75131 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE3O75131 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE3O75131 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CPNE3O75131 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.82■□□□□ 0.44
CPNE3O75131 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.82■□□□□ 0.44
CPNE3O75131 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE3O75131 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CPNE3O75131 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE3O75131 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE3O75131 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE3O75131 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE3O75131 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.81■□□□□ 0.44
CPNE3O75131 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.81■□□□□ 0.44
CPNE3O75131 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.81■□□□□ 0.44
CPNE3O75131 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.81■□□□□ 0.44
CPNE3O75131 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPNE3O75131 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.81■□□□□ 0.44
CPNE3O75131 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE3O75131 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 TEX21P-204ENST00000641479 1693 ntBASIC17.8■□□□□ 0.44
CPNE3O75131 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPNE3O75131 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE3O75131 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPNE3O75131 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE3O75131 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE3O75131 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE3O75131 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE3O75131 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE3O75131 AC116407.4-201ENST00000623319 1061 ntBASIC17.8■□□□□ 0.44
CPNE3O75131 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE3O75131 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE3O75131 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms