Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PRAMEF11O60813 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.84■□□□□ 0.61
PRAMEF11O60813 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.84■□□□□ 0.61
PRAMEF11O60813 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PRAMEF11O60813 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PRAMEF11O60813 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAMEF11O60813 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.83■□□□□ 0.61
PRAMEF11O60813 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF11O60813 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF11O60813 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF11O60813 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF11O60813 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF11O60813 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAMEF11O60813 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PRAMEF11O60813 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.83■□□□□ 0.61
PRAMEF11O60813 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 STARP1-201ENST00000397973 869 ntBASIC18.83■□□□□ 0.6
PRAMEF11O60813 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PRAMEF11O60813 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 HOMER2P1-201ENST00000455653 964 ntBASIC18.83■□□□□ 0.6
PRAMEF11O60813 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF11O60813 AL157888.1-201ENST00000631930 593 ntBASIC18.83■□□□□ 0.6
PRAMEF11O60813 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAMEF11O60813 AC073592.3-201ENST00000625118 1834 ntBASIC18.83■□□□□ 0.6
PRAMEF11O60813 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF11O60813 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAMEF11O60813 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 RASA4DP-201ENST00000460726 1199 ntBASIC18.82■□□□□ 0.6
PRAMEF11O60813 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 AC022616.7-201ENST00000525383 220 ntBASIC18.82■□□□□ 0.6
PRAMEF11O60813 AC009065.1-201ENST00000564055 1225 ntBASIC18.82■□□□□ 0.6
PRAMEF11O60813 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF11O60813 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF11O60813 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 MIR149-201ENST00000384879 89 ntBASIC18.81■□□□□ 0.6
PRAMEF11O60813 FAM8A6P-201ENST00000407496 1135 ntBASIC18.81■□□□□ 0.6
PRAMEF11O60813 SPDYE15P-201ENST00000424157 909 ntBASIC18.81■□□□□ 0.6
PRAMEF11O60813 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
PRAMEF11O60813 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF11O60813 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms