Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNT1O60563 KRT8P7-201ENST00000533003 1432 ntBASIC21.09■□□□□ 0.97
CCNT1O60563 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNT1O60563 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 AP000523.1-201ENST00000398242 1049 ntBASIC21.08■□□□□ 0.97
CCNT1O60563 BX664615.1-201ENST00000443558 458 ntBASIC21.08■□□□□ 0.97
CCNT1O60563 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CCNT1O60563 MYLKP1-201ENST00000509077 1580 ntBASIC21.08■□□□□ 0.97
CCNT1O60563 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNT1O60563 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNT1O60563 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.08■□□□□ 0.97
CCNT1O60563 RN7SL850P-201ENST00000579959 291 ntBASIC21.08■□□□□ 0.97
CCNT1O60563 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCNT1O60563 AL023973.1-201ENST00000624619 620 ntBASIC21.08■□□□□ 0.97
CCNT1O60563 AC092865.7-201ENST00000641832 219 ntBASIC21.08■□□□□ 0.97
CCNT1O60563 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCNT1O60563 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.08■□□□□ 0.96
CCNT1O60563 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.08■□□□□ 0.96
CCNT1O60563 AC099343.3-201ENST00000605834 2503 ntBASIC21.08■□□□□ 0.96
CCNT1O60563 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.08■□□□□ 0.96
CCNT1O60563 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.07■□□□□ 0.96
CCNT1O60563 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 COX11P1-201ENST00000489116 835 ntBASIC21.07■□□□□ 0.96
CCNT1O60563 KRT18P21-201ENST00000515767 1272 ntBASIC21.07■□□□□ 0.96
CCNT1O60563 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.07■□□□□ 0.96
CCNT1O60563 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 AC139887.4-201ENST00000607877 719 ntBASIC21.07■□□□□ 0.96
CCNT1O60563 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CCNT1O60563 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNT1O60563 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNT1O60563 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCNT1O60563 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CCNT1O60563 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CCNT1O60563 AC104581.1-202ENST00000635932 2618 ntBASIC21.06■□□□□ 0.96
CCNT1O60563 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 AP000593.1-201ENST00000393668 712 ntBASIC21.06■□□□□ 0.96
CCNT1O60563 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.06■□□□□ 0.96
CCNT1O60563 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.06■□□□□ 0.96
CCNT1O60563 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.06■□□□□ 0.96
CCNT1O60563 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.06■□□□□ 0.96
CCNT1O60563 AC140113.3-201ENST00000605663 199 ntBASIC21.06■□□□□ 0.96
CCNT1O60563 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CCNT1O60563 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CCNT1O60563 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNT1O60563 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCNT1O60563 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms