Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.71■□□□□ 0.27
ZIC3O60481 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.71■□□□□ 0.27
ZIC3O60481 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.71■□□□□ 0.27
ZIC3O60481 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.71■□□□□ 0.27
ZIC3O60481 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.71■□□□□ 0.27
ZIC3O60481 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.71■□□□□ 0.27
ZIC3O60481 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
ZIC3O60481 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ZIC3O60481 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZIC3O60481 AC087289.5-201ENST00000586076 3175 ntBASIC16.71■□□□□ 0.26
ZIC3O60481 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.7■□□□□ 0.26
ZIC3O60481 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ZIC3O60481 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ZIC3O60481 AIRN-201ENST00000601203 4374 ntBASIC16.7■□□□□ 0.26
ZIC3O60481 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.7■□□□□ 0.26
ZIC3O60481 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 AL391807.1-203ENST00000604392 2365 ntBASIC16.7■□□□□ 0.26
ZIC3O60481 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.7■□□□□ 0.26
ZIC3O60481 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.7■□□□□ 0.26
ZIC3O60481 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
ZIC3O60481 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.7■□□□□ 0.26
ZIC3O60481 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 HLA-F-220ENST00000434407 884 ntBASIC16.7■□□□□ 0.26
ZIC3O60481 FAM86EP-206ENST00000510506 987 ntBASIC16.7■□□□□ 0.26
ZIC3O60481 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ZIC3O60481 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.7■□□□□ 0.26
ZIC3O60481 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.7■□□□□ 0.26
ZIC3O60481 AC083849.1-201ENST00000615227 514 ntBASIC16.7■□□□□ 0.26
ZIC3O60481 AL121956.5-201ENST00000625261 221 ntBASIC16.7■□□□□ 0.26
ZIC3O60481 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.7■□□□□ 0.26
ZIC3O60481 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 TNXA-203ENST00000507684 2038 ntBASIC16.7■□□□□ 0.26
ZIC3O60481 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZIC3O60481 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.69■□□□□ 0.26
ZIC3O60481 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
ZIC3O60481 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.69■□□□□ 0.26
ZIC3O60481 SPDYE13P-201ENST00000445314 798 ntBASIC16.69■□□□□ 0.26
ZIC3O60481 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.69■□□□□ 0.26
ZIC3O60481 ZNF444P1-201ENST00000559497 298 ntBASIC16.69■□□□□ 0.26
ZIC3O60481 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
ZIC3O60481 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.69■□□□□ 0.26
ZIC3O60481 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.69■□□□□ 0.26
ZIC3O60481 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZIC3O60481 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZIC3O60481 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.68■□□□□ 0.26
ZIC3O60481 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZIC3O60481 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ZIC3O60481 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.68■□□□□ 0.26
ZIC3O60481 PVRIG2P-201ENST00000435460 978 ntBASIC16.68■□□□□ 0.26
ZIC3O60481 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.68■□□□□ 0.26
ZIC3O60481 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.68■□□□□ 0.26
ZIC3O60481 AL136038.3-201ENST00000561909 1096 ntBASIC16.68■□□□□ 0.26
ZIC3O60481 AC009065.1-201ENST00000564055 1225 ntBASIC16.68■□□□□ 0.26
ZIC3O60481 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.68■□□□□ 0.26
ZIC3O60481 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.68■□□□□ 0.26
ZIC3O60481 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
ZIC3O60481 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms