Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB2O43679 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LDB2O43679 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LDB2O43679 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.57■□□□□ 0.56
LDB2O43679 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.57■□□□□ 0.56
LDB2O43679 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.57■□□□□ 0.56
LDB2O43679 LINC01023-201ENST00000606054 436 ntBASIC18.57■□□□□ 0.56
LDB2O43679 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.57■□□□□ 0.56
LDB2O43679 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LDB2O43679 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.57■□□□□ 0.56
LDB2O43679 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LDB2O43679 KRT8P7-201ENST00000533003 1432 ntBASIC18.57■□□□□ 0.56
LDB2O43679 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.57■□□□□ 0.56
LDB2O43679 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB2O43679 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
LDB2O43679 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LDB2O43679 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.56■□□□□ 0.56
LDB2O43679 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.56■□□□□ 0.56
LDB2O43679 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.56■□□□□ 0.56
LDB2O43679 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.56■□□□□ 0.56
LDB2O43679 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.56■□□□□ 0.56
LDB2O43679 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 HMGA1P5-201ENST00000412453 271 ntBASIC18.56■□□□□ 0.56
LDB2O43679 KRT18P23-201ENST00000435622 1283 ntBASIC18.56■□□□□ 0.56
LDB2O43679 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.56■□□□□ 0.56
LDB2O43679 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LDB2O43679 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
LDB2O43679 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.56■□□□□ 0.56
LDB2O43679 AC133561.5-201ENST00000635547 218 ntBASIC18.56■□□□□ 0.56
LDB2O43679 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.56■□□□□ 0.56
LDB2O43679 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
LDB2O43679 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
LDB2O43679 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDB2O43679 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDB2O43679 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDB2O43679 KRT18P22-201ENST00000402024 1347 ntBASIC18.55■□□□□ 0.56
LDB2O43679 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB2O43679 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LDB2O43679 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.55■□□□□ 0.56
LDB2O43679 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB2O43679 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB2O43679 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.55■□□□□ 0.56
LDB2O43679 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB2O43679 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB2O43679 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.55■□□□□ 0.56
LDB2O43679 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.55■□□□□ 0.56
LDB2O43679 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.55■□□□□ 0.56
LDB2O43679 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.55■□□□□ 0.56
LDB2O43679 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDB2O43679 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDB2O43679 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LDB2O43679 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDB2O43679 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms