Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 AP005901.3-202ENST00000581653 237 ntBASIC23.81■■□□□ 1.4
KCNQ3O43525 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.81■■□□□ 1.4
KCNQ3O43525 IGHV3-41-201ENST00000613121 348 ntBASIC23.81■■□□□ 1.4
KCNQ3O43525 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.81■■□□□ 1.4
KCNQ3O43525 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNQ3O43525 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
KCNQ3O43525 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
KCNQ3O43525 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 TSPY19P-201ENST00000418461 509 ntBASIC23.8■■□□□ 1.4
KCNQ3O43525 TSPY18P-201ENST00000441642 509 ntBASIC23.8■■□□□ 1.4
KCNQ3O43525 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
KCNQ3O43525 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.8■■□□□ 1.4
KCNQ3O43525 FOSL1P1-201ENST00000511041 816 ntBASIC23.8■■□□□ 1.4
KCNQ3O43525 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
KCNQ3O43525 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.8■■□□□ 1.4
KCNQ3O43525 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.8■■□□□ 1.4
KCNQ3O43525 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNQ3O43525 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
KCNQ3O43525 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
KCNQ3O43525 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KCNQ3O43525 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.79■■□□□ 1.4
KCNQ3O43525 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
KCNQ3O43525 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
KCNQ3O43525 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.79■■□□□ 1.4
KCNQ3O43525 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
KCNQ3O43525 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.79■■□□□ 1.4
KCNQ3O43525 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.79■■□□□ 1.4
KCNQ3O43525 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.79■■□□□ 1.4
KCNQ3O43525 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
KCNQ3O43525 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KCNQ3O43525 IFNL4P1-201ENST00000607083 540 ntBASIC23.79■■□□□ 1.4
KCNQ3O43525 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KCNQ3O43525 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.79■■□□□ 1.4
KCNQ3O43525 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.79■■□□□ 1.4
KCNQ3O43525 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.79■■□□□ 1.4
KCNQ3O43525 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNQ3O43525 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
KCNQ3O43525 AC233702.3-201ENST00000578656 1387 ntBASIC23.78■■□□□ 1.4
KCNQ3O43525 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KCNQ3O43525 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNQ3O43525 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNQ3O43525 LINC00167-201ENST00000530583 1419 ntBASIC23.78■■□□□ 1.4
KCNQ3O43525 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KCNQ3O43525 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.78■■□□□ 1.4
KCNQ3O43525 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KCNQ3O43525 EMBP1-201ENST00000458200 901 ntBASIC23.78■■□□□ 1.4
KCNQ3O43525 AL592071.1-201ENST00000611956 408 ntBASIC23.78■■□□□ 1.4
KCNQ3O43525 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.78■■□□□ 1.4
KCNQ3O43525 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KCNQ3O43525 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KCNQ3O43525 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.78■■□□□ 1.4
KCNQ3O43525 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.78■■□□□ 1.4
KCNQ3O43525 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.77■■□□□ 1.4
KCNQ3O43525 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNQ3O43525 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNQ3O43525 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.77■■□□□ 1.4
KCNQ3O43525 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ3O43525 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNQ3O43525 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.77■■□□□ 1.4
KCNQ3O43525 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.77■■□□□ 1.4
KCNQ3O43525 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.77■■□□□ 1.4
KCNQ3O43525 AC090616.6-201ENST00000582640 721 ntBASIC23.77■■□□□ 1.4
KCNQ3O43525 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNQ3O43525 AC124864.1-201ENST00000623408 392 ntBASIC23.77■■□□□ 1.4
KCNQ3O43525 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.77■■□□□ 1.4
KCNQ3O43525 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms