Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MSI1O43347 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSI1O43347 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MSI1O43347 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.3■□□□□ 0.68
MSI1O43347 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSI1O43347 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MSI1O43347 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
MSI1O43347 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MSI1O43347 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.29■□□□□ 0.68
MSI1O43347 ANO7L1-203ENST00000602586 1720 ntBASIC19.29■□□□□ 0.68
MSI1O43347 KRT8P7-201ENST00000533003 1432 ntBASIC19.29■□□□□ 0.68
MSI1O43347 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.29■□□□□ 0.68
MSI1O43347 AL031133.1-201ENST00000406807 723 ntBASIC19.29■□□□□ 0.68
MSI1O43347 AL671277.2-201ENST00000458060 996 ntBASIC19.29■□□□□ 0.68
MSI1O43347 AC092597.1-201ENST00000487352 616 ntBASIC19.29■□□□□ 0.68
MSI1O43347 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.29■□□□□ 0.68
MSI1O43347 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.29■□□□□ 0.68
MSI1O43347 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
MSI1O43347 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.29■□□□□ 0.68
MSI1O43347 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.29■□□□□ 0.68
MSI1O43347 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.29■□□□□ 0.68
MSI1O43347 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MSI1O43347 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
MSI1O43347 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.29■□□□□ 0.68
MSI1O43347 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
MSI1O43347 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 AL020996.1-203ENST00000536896 2307 ntBASIC19.29■□□□□ 0.68
MSI1O43347 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.29■□□□□ 0.68
MSI1O43347 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSI1O43347 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.28■□□□□ 0.68
MSI1O43347 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.28■□□□□ 0.68
MSI1O43347 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.28■□□□□ 0.68
MSI1O43347 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 AC034232.1-201ENST00000506026 1064 ntBASIC19.28■□□□□ 0.68
MSI1O43347 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.28■□□□□ 0.68
MSI1O43347 MIR3917-201ENST00000580971 93 ntBASIC19.28■□□□□ 0.68
MSI1O43347 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.28■□□□□ 0.68
MSI1O43347 HYMAI.1-201ENST00000620949 238 ntBASIC19.28■□□□□ 0.68
MSI1O43347 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.28■□□□□ 0.68
MSI1O43347 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.28■□□□□ 0.68
MSI1O43347 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MSI1O43347 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
MSI1O43347 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.27■□□□□ 0.68
MSI1O43347 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.27■□□□□ 0.68
MSI1O43347 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.27■□□□□ 0.68
MSI1O43347 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.27■□□□□ 0.68
MSI1O43347 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 AC083849.1-201ENST00000615227 514 ntBASIC19.27■□□□□ 0.68
MSI1O43347 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MSI1O43347 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSI1O43347 AC005082.1-201ENST00000413042 2259 ntBASIC19.27■□□□□ 0.68
MSI1O43347 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MSI1O43347 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
MSI1O43347 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.26■□□□□ 0.67
MSI1O43347 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MSI1O43347 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.26■□□□□ 0.67
MSI1O43347 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.26■□□□□ 0.67
MSI1O43347 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.26■□□□□ 0.67
MSI1O43347 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MSI1O43347 AC079602.3-201ENST00000623931 403 ntBASIC19.26■□□□□ 0.67
MSI1O43347 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
MSI1O43347 AC093525.10-201ENST00000625130 1569 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms