Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.8■■□□□ 1.72
CHD2O14647 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 RAB17-203ENST00000409576 466 ntTSL 3 BASIC25.8■■□□□ 1.72
CHD2O14647 AC007967.2-201ENST00000432613 625 ntBASIC25.8■■□□□ 1.72
CHD2O14647 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC25.8■■□□□ 1.72
CHD2O14647 DNAJB3-201ENST00000446806 729 ntBASIC25.8■■□□□ 1.72
CHD2O14647 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC25.8■■□□□ 1.72
CHD2O14647 HS6ST1P1-201ENST00000481504 1234 ntBASIC25.8■■□□□ 1.72
CHD2O14647 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC25.8■■□□□ 1.72
CHD2O14647 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC25.8■■□□□ 1.72
CHD2O14647 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD2O14647 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
CHD2O14647 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 AC007375.3-201ENST00000600936 2314 ntBASIC25.8■■□□□ 1.72
CHD2O14647 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD2O14647 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD2O14647 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC25.79■■□□□ 1.72
CHD2O14647 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CHD2O14647 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC25.79■■□□□ 1.72
CHD2O14647 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC25.79■■□□□ 1.72
CHD2O14647 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC25.79■■□□□ 1.72
CHD2O14647 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD2O14647 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD2O14647 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD2O14647 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC25.79■■□□□ 1.72
CHD2O14647 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD2O14647 KRT18P3-201ENST00000451602 1288 ntBASIC25.79■■□□□ 1.72
CHD2O14647 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC25.79■■□□□ 1.72
CHD2O14647 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC25.79■■□□□ 1.72
CHD2O14647 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD2O14647 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CHD2O14647 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD2O14647 FEM1AP3-201ENST00000403722 1741 ntBASIC25.78■■□□□ 1.72
CHD2O14647 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC25.78■■□□□ 1.72
CHD2O14647 HEIH-201ENST00000623091 1652 ntBASIC25.78■■□□□ 1.72
CHD2O14647 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.78■■□□□ 1.72
CHD2O14647 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC25.78■■□□□ 1.72
CHD2O14647 AC134684.3-201ENST00000641758 218 ntBASIC25.78■■□□□ 1.72
CHD2O14647 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHD2O14647 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD2O14647 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD2O14647 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD2O14647 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC25.78■■□□□ 1.72
CHD2O14647 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CHD2O14647 RPS2P28-201ENST00000314255 741 ntBASIC25.77■■□□□ 1.72
CHD2O14647 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD2O14647 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC25.77■■□□□ 1.72
CHD2O14647 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD2O14647 AC112482.1-201ENST00000492080 688 ntBASIC25.77■■□□□ 1.72
CHD2O14647 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD2O14647 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD2O14647 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
CHD2O14647 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD2O14647 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD2O14647 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC25.77■■□□□ 1.72
CHD2O14647 PMP22-202ENST00000395936 816 ntTSL 3 BASIC25.77■■□□□ 1.72
CHD2O14647 DANCR-204ENST00000444958 709 ntTSL 3 BASIC25.77■■□□□ 1.72
CHD2O14647 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC25.77■■□□□ 1.72
CHD2O14647 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC25.77■■□□□ 1.72
CHD2O14647 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD2O14647 AC011467.2-201ENST00000598425 242 ntBASIC25.77■■□□□ 1.72
CHD2O14647 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD2O14647 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHD2O14647 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD2O14647 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
CHD2O14647 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHD2O14647 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD2O14647 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC25.76■■□□□ 1.71
CHD2O14647 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC25.76■■□□□ 1.71
CHD2O14647 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHD2O14647 HLA-J-201ENST00000462773 1622 ntBASIC25.76■■□□□ 1.71
CHD2O14647 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD2O14647 IRX1P1-201ENST00000438849 1838 ntBASIC25.76■■□□□ 1.71
CHD2O14647 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CHD2O14647 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD2O14647 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CHD2O14647 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD2O14647 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD2O14647 AP006288.1-201ENST00000446065 395 ntBASIC25.75■■□□□ 1.71
CHD2O14647 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD2O14647 AC009533.2-201ENST00000543664 586 ntBASIC25.75■■□□□ 1.71
CHD2O14647 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC25.75■■□□□ 1.71
CHD2O14647 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CHD2O14647 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD2O14647 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
CHD2O14647 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD2O14647 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD2O14647 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD2O14647 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
CHD2O14647 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD2O14647 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC25.74■■□□□ 1.71
CHD2O14647 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms