Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 LINC00265-3P-201ENST00000447588 903 ntBASIC16.31■□□□□ 0.2
MBD3L3A6NE82 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 IGHV3-41-201ENST00000613121 348 ntBASIC16.31■□□□□ 0.2
MBD3L3A6NE82 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L3A6NE82 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 AC112777.1-201ENST00000540175 1423 ntBASIC16.3■□□□□ 0.2
MBD3L3A6NE82 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 TOB2P1-201ENST00000469761 992 ntBASIC16.3■□□□□ 0.2
MBD3L3A6NE82 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
MBD3L3A6NE82 AC008687.5-201ENST00000593746 558 ntBASIC16.3■□□□□ 0.2
MBD3L3A6NE82 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 AIRN-201ENST00000601203 4374 ntBASIC16.3■□□□□ 0.2
MBD3L3A6NE82 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L3A6NE82 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.3■□□□□ 0.2
MBD3L3A6NE82 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
MBD3L3A6NE82 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 AC116562.4-201ENST00000641316 2276 ntBASIC16.29■□□□□ 0.2
MBD3L3A6NE82 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 GUSBP12-201ENST00000513727 720 ntBASIC16.29■□□□□ 0.2
MBD3L3A6NE82 AP000867.3-201ENST00000524675 377 ntBASIC16.29■□□□□ 0.2
MBD3L3A6NE82 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L3A6NE82 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 AL353692.3-201ENST00000407031 1396 ntBASIC16.28■□□□□ 0.2
MBD3L3A6NE82 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 AC111152.3-201ENST00000569699 673 ntBASIC16.28■□□□□ 0.2
MBD3L3A6NE82 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 AL592071.1-201ENST00000611956 408 ntBASIC16.28■□□□□ 0.2
MBD3L3A6NE82 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MBD3L3A6NE82 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms