Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 AL355355.2-201ENST00000442321 338 ntBASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 AC068880.1-201ENST00000507289 2297 ntBASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 ESPNP-201ENST00000270691 2015 ntBASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 TSPY7P-201ENST00000431358 1114 ntBASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 AP003071.4-201ENST00000562276 1284 ntBASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 MYLKP1-201ENST00000509077 1580 ntBASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM49BA6NDI0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 AL162741.1-201ENST00000565563 1558 ntBASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 MCCD1P1-208ENST00000445732 328 ntBASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 AP001412.1-201ENST00000608405 714 ntBASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 MYC-208ENST00000641036 567 ntBASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM49BA6NDI0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms