Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC009947.2-201ENST00000444014 672 ntBASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC126763.1-201ENST00000552015 2118 ntBASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC196A0A1B0GTZ2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC113347.1-201ENST00000413321 391 ntBASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 AL138966.2-201ENST00000621997 464 ntBASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC196A0A1B0GTZ2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC005082.1-201ENST00000413042 2259 ntBASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 ATP5G1P1-201ENST00000448724 379 ntBASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 MIR3180-4-201ENST00000582223 153 ntBASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC141257.4-201ENST00000634557 245 ntBASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC136944.6-201ENST00000634818 245 ntBASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC196A0A1B0GTZ2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 AC090164.3-201ENST00000610780 2143 ntBASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCDC196A0A1B0GTZ2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC196A0A1B0GTZ2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms