Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 AL096828.2-201ENST00000567259 1965 ntBASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 ID1-201ENST00000376105 1233 ntBASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 AF186192.3-201ENST00000583427 947 ntBASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 AP000692.2-201ENST00000608391 879 ntBASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV5-3A0A0A0MS03 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 RARRES2P10-201ENST00000564312 460 ntBASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC073195.1-201ENST00000607241 877 ntBASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 GPAT2P1-201ENST00000444924 1672 ntBASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV5-3A0A0A0MS03 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 PHGDH-209ENST00000641074 1780 ntBASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC006058.3-201ENST00000606217 1069 ntBASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV5-3A0A0A0MS03 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms