Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 AC008550.1-201ENST00000511500 884 ntBASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 TMEM191A-211ENST00000637163 1067 ntBASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 MCCD1P1-208ENST00000445732 328 ntBASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 KRT18P41-201ENST00000518924 1277 ntBASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
CYP46A1Q9Y6A2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 MIR564-202ENST00000385049 94 ntBASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.08■■□□□ 1.13
CYP46A1Q9Y6A2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CYP46A1Q9Y6A2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CYP46A1Q9Y6A2 AL162741.1-201ENST00000565563 1558 ntBASIC22.08■■□□□ 1.12
CYP46A1Q9Y6A2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 MIR718-201ENST00000390190 70 ntBASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 AP005242.2-201ENST00000580065 1175 ntBASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 MYLKP1-201ENST00000509077 1580 ntBASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CYP46A1Q9Y6A2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 ABALON-201ENST00000629058 1903 ntBASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 TSPY7P-201ENST00000431358 1114 ntBASIC22.06■■□□□ 1.12
CYP46A1Q9Y6A2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms