Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 Z82202.1-201ENST00000623446 1880 ntBASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 AC083849.1-201ENST00000615227 514 ntBASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 AC093458.2-201ENST00000623150 629 ntBASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA3Q9Y5H0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA3Q9Y5H0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 AC106820.2-201ENST00000563775 3264 ntBASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 MIR4674-201ENST00000582457 87 ntBASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA3Q9Y5H0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms