Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.43■□□□□ 0.7
YIPF1Q9Y548 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
YIPF1Q9Y548 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YIPF1Q9Y548 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YIPF1Q9Y548 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
YIPF1Q9Y548 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
YIPF1Q9Y548 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
YIPF1Q9Y548 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 IGHGP-201ENST00000390555 1178 ntBASIC19.42■□□□□ 0.7
YIPF1Q9Y548 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 TOB2P1-201ENST00000469761 992 ntBASIC19.42■□□□□ 0.7
YIPF1Q9Y548 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 KRT18P41-201ENST00000518924 1277 ntBASIC19.42■□□□□ 0.7
YIPF1Q9Y548 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
YIPF1Q9Y548 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 AP000867.3-201ENST00000524675 377 ntBASIC19.41■□□□□ 0.7
YIPF1Q9Y548 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
YIPF1Q9Y548 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 AP000593.1-201ENST00000393668 712 ntBASIC19.4■□□□□ 0.7
YIPF1Q9Y548 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 AC026396.1-201ENST00000419388 421 ntBASIC19.4■□□□□ 0.7
YIPF1Q9Y548 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 AC090616.6-201ENST00000582640 721 ntBASIC19.4■□□□□ 0.7
YIPF1Q9Y548 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
YIPF1Q9Y548 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.39■□□□□ 0.7
YIPF1Q9Y548 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
YIPF1Q9Y548 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
YIPF1Q9Y548 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.39■□□□□ 0.7
YIPF1Q9Y548 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 AC005332.7-201ENST00000614046 2005 ntBASIC19.39■□□□□ 0.69
YIPF1Q9Y548 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 NUS1P1-201ENST00000446295 882 ntBASIC19.39■□□□□ 0.69
YIPF1Q9Y548 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 AC111152.3-201ENST00000569699 673 ntBASIC19.39■□□□□ 0.69
YIPF1Q9Y548 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
YIPF1Q9Y548 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF1Q9Y548 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms