Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
RHBDD3Q9Y3P4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.33■□□□□ 0.21
RHBDD3Q9Y3P4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RHBDD3Q9Y3P4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.33■□□□□ 0.21
RHBDD3Q9Y3P4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 AC098590.1-201ENST00000468126 897 ntBASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 AC073195.1-201ENST00000607241 877 ntBASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDD3Q9Y3P4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 KRT8P11-201ENST00000409686 1436 ntBASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 AL158047.1-201ENST00000445918 881 ntBASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 AC073592.3-201ENST00000625118 1834 ntBASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDD3Q9Y3P4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 AC068880.1-201ENST00000507289 2297 ntBASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 RCC2P6-201ENST00000526625 1557 ntBASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 AC091390.4-202ENST00000476426 537 ntBASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 AL031985.4-201ENST00000642138 673 ntBASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RHBDD3Q9Y3P4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms