Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3H4Q9UPT8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 DNAJB3-202ENST00000449667 1266 ntBASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 MTDHP3-201ENST00000594186 672 ntBASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3H4Q9UPT8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3H4Q9UPT8 HLA-J-201ENST00000462773 1622 ntBASIC22.45■■□□□ 1.19
ZC3H4Q9UPT8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.45■■□□□ 1.19
ZC3H4Q9UPT8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.45■■□□□ 1.19
ZC3H4Q9UPT8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.45■■□□□ 1.19
ZC3H4Q9UPT8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
ZC3H4Q9UPT8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 AC007952.6-201ENST00000573168 2673 ntBASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 AC003957.1-201ENST00000625108 2673 ntBASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 RCC2P3-201ENST00000418112 1537 ntBASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3H4Q9UPT8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 CYMP-203ENST00000474680 1263 ntBASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 AC002347.1-201ENST00000569543 541 ntBASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 AP001269.4-201ENST00000609611 512 ntBASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
ZC3H4Q9UPT8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 AC008556.1-201ENST00000610908 2040 ntBASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms