Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 HLA-F-220ENST00000434407 884 ntBASIC17.57■□□□□ 0.4
LHX6Q9UPM6 HLA-J-202ENST00000469281 1241 ntBASIC17.57■□□□□ 0.4
LHX6Q9UPM6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 AC079602.3-201ENST00000623931 403 ntBASIC17.57■□□□□ 0.4
LHX6Q9UPM6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LHX6Q9UPM6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 AC112482.1-201ENST00000492080 688 ntBASIC17.56■□□□□ 0.4
LHX6Q9UPM6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 AL136038.4-201ENST00000603606 1261 ntBASIC17.56■□□□□ 0.4
LHX6Q9UPM6 AC027601.4-201ENST00000611259 610 ntBASIC17.56■□□□□ 0.4
LHX6Q9UPM6 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 AC087289.5-201ENST00000586076 3175 ntBASIC17.56■□□□□ 0.4
LHX6Q9UPM6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LHX6Q9UPM6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 DNAJB3-201ENST00000446806 729 ntBASIC17.55■□□□□ 0.4
LHX6Q9UPM6 CYMP-203ENST00000474680 1263 ntBASIC17.55■□□□□ 0.4
LHX6Q9UPM6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 AC103798.2-201ENST00000624292 632 ntBASIC17.55■□□□□ 0.4
LHX6Q9UPM6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 KRT8P41-201ENST00000533985 1514 ntBASIC17.55■□□□□ 0.4
LHX6Q9UPM6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LHX6Q9UPM6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LHX6Q9UPM6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX6Q9UPM6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX6Q9UPM6 KRT18P28-201ENST00000453838 1332 ntBASIC17.54■□□□□ 0.4
LHX6Q9UPM6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LHX6Q9UPM6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LHX6Q9UPM6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.54■□□□□ 0.4
LHX6Q9UPM6 SCARNA2-201ENST00000458748 420 ntBASIC17.54■□□□□ 0.4
LHX6Q9UPM6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms