Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 AC090164.3-201ENST00000610780 2143 ntBASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CALCOCO1Q9P1Z2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 MIR1224-201ENST00000408193 85 ntBASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CALCOCO1Q9P1Z2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 AC004264.1-201ENST00000608354 794 ntBASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 BICD1-207ENST00000551848 1962 ntBASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.28■□□□□ 0.84
CALCOCO1Q9P1Z2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 KRT18P21-201ENST00000515767 1272 ntBASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALCOCO1Q9P1Z2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.27■□□□□ 0.83
CALCOCO1Q9P1Z2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CALCOCO1Q9P1Z2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CALCOCO1Q9P1Z2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.27■□□□□ 0.83
CALCOCO1Q9P1Z2 HTR7P1-201ENST00000538670 1336 ntBASIC20.27■□□□□ 0.83
CALCOCO1Q9P1Z2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 AC087499.1-201ENST00000418141 1075 ntBASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.26■□□□□ 0.83
CALCOCO1Q9P1Z2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms