Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RBM28Q9NW13 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RBM28Q9NW13 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.58■■□□□ 1.04
RBM28Q9NW13 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RBM28Q9NW13 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.58■■□□□ 1.04
RBM28Q9NW13 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RBM28Q9NW13 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 WIZP1-201ENST00000531444 2299 ntBASIC21.57■■□□□ 1.04
RBM28Q9NW13 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 RCN1P1-201ENST00000400413 996 ntBASIC21.57■■□□□ 1.04
RBM28Q9NW13 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBM28Q9NW13 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.57■■□□□ 1.04
RBM28Q9NW13 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 SEC1P-202ENST00000473944 940 ntBASIC21.56■■□□□ 1.04
RBM28Q9NW13 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 MIR3180-4-201ENST00000582223 153 ntBASIC21.56■■□□□ 1.04
RBM28Q9NW13 AC024243.1-201ENST00000609234 778 ntBASIC21.56■■□□□ 1.04
RBM28Q9NW13 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.56■■□□□ 1.04
RBM28Q9NW13 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RBM28Q9NW13 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 AC073592.3-201ENST00000625118 1834 ntBASIC21.55■■□□□ 1.04
RBM28Q9NW13 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.55■■□□□ 1.04
RBM28Q9NW13 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 AC140113.3-201ENST00000605663 199 ntBASIC21.55■■□□□ 1.04
RBM28Q9NW13 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 AL023973.1-201ENST00000624619 620 ntBASIC21.55■■□□□ 1.04
RBM28Q9NW13 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.55■■□□□ 1.04
RBM28Q9NW13 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBM28Q9NW13 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.54■■□□□ 1.04
RBM28Q9NW13 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RBM28Q9NW13 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms