Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ECEL1P3-201ENST00000427961 737 ntBASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 AC010203.1-204ENST00000548782 407 ntBASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 AC211429.1-201ENST00000415277 523 ntBASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 KRT8P7-201ENST00000533003 1432 ntBASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
BLOC1S4Q9NUP1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 AC112497.1-201ENST00000624824 639 ntBASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BLOC1S4Q9NUP1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 AC135050.7-201ENST00000624508 2218 ntBASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 SEC1P-202ENST00000473944 940 ntBASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 AC104390.1-201ENST00000555663 520 ntBASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 AL163051.1-201ENST00000569214 1512 ntBASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BLOC1S4Q9NUP1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms