Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 AC009053.2-201ENST00000563701 2365 ntBASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 KRT17P3-201ENST00000420566 1262 ntBASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB16Q9NRJ7 WIZP1-201ENST00000531444 2299 ntBASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 AC135050.7-201ENST00000624508 2218 ntBASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 C1QL1P1-201ENST00000568105 661 ntBASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB16Q9NRJ7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 UNC93B5-201ENST00000530315 699 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms