Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TLR9Q9NR96 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TLR9Q9NR96 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TLR9Q9NR96 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TLR9Q9NR96 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.72■□□□□ 0.75
TLR9Q9NR96 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.72■□□□□ 0.75
TLR9Q9NR96 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TLR9Q9NR96 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TLR9Q9NR96 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TLR9Q9NR96 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 RN7SL606P-201ENST00000472779 293 ntBASIC19.71■□□□□ 0.75
TLR9Q9NR96 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 AC139530.3-201ENST00000620344 690 ntBASIC19.71■□□□□ 0.75
TLR9Q9NR96 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 NSUN5P1-202ENST00000421140 1535 ntBASIC19.71■□□□□ 0.75
TLR9Q9NR96 NSUN5P2-203ENST00000457352 1529 ntBASIC19.71■□□□□ 0.75
TLR9Q9NR96 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.71■□□□□ 0.75
TLR9Q9NR96 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TLR9Q9NR96 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.71■□□□□ 0.75
TLR9Q9NR96 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 TSPY12P-201ENST00000421279 868 ntBASIC19.7■□□□□ 0.74
TLR9Q9NR96 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.7■□□□□ 0.74
TLR9Q9NR96 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.7■□□□□ 0.74
TLR9Q9NR96 BX640515.1-201ENST00000617215 977 ntBASIC19.7■□□□□ 0.74
TLR9Q9NR96 REXO1L6P-202ENST00000619970 1078 ntBASIC19.7■□□□□ 0.74
TLR9Q9NR96 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.7■□□□□ 0.74
TLR9Q9NR96 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.7■□□□□ 0.74
TLR9Q9NR96 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TLR9Q9NR96 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TLR9Q9NR96 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 FEM1AP3-201ENST00000403722 1741 ntBASIC19.69■□□□□ 0.74
TLR9Q9NR96 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 NUS1P2-201ENST00000417358 873 ntBASIC19.69■□□□□ 0.74
TLR9Q9NR96 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.69■□□□□ 0.74
TLR9Q9NR96 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TLR9Q9NR96 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
TLR9Q9NR96 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms