Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 MCCD1P1-208ENST00000445732 328 ntBASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 AC104819.1-201ENST00000504587 486 ntBASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 AC138894.3-201ENST00000603787 634 ntBASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 AC008556.1-201ENST00000610908 2040 ntBASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 MIR3917-201ENST00000580971 93 ntBASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 MIR3180-5-201ENST00000583743 153 ntBASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 AL353801.3-201ENST00000609898 542 ntBASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 AC117500.6-201ENST00000624871 588 ntBASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.8■□□□□ 0.92
PDLIM7Q9NR12 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 AL590627.1-203ENST00000421194 1026 ntBASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDLIM7Q9NR12 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 KRT18P13-201ENST00000400056 1290 ntBASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.78■□□□□ 0.92
PDLIM7Q9NR12 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms