Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.56■■□□□ 1.04
GPCPD1Q9NPB8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GPCPD1Q9NPB8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 AL391807.1-203ENST00000604392 2365 ntBASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 AL136038.4-201ENST00000603606 1261 ntBASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 KRT8P50-201ENST00000562022 1438 ntBASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 AC099343.3-201ENST00000605834 2503 ntBASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GPCPD1Q9NPB8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 AC093458.2-201ENST00000623150 629 ntBASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GPCPD1Q9NPB8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.52■■□□□ 1.04
GPCPD1Q9NPB8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms