Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRTM1Q9HBL6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 AL359736.2-201ENST00000621992 437 ntBASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.92■□□□□ 0.46
LRTM1Q9HBL6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 HTR7P1-202ENST00000624664 4411 ntBASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.91■□□□□ 0.46
LRTM1Q9HBL6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 FSCN1P1-201ENST00000568912 1481 ntBASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 AP000692.2-201ENST00000608391 879 ntBASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 AC066615.1-201ENST00000640911 628 ntBASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRTM1Q9HBL6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
LRTM1Q9HBL6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRTM1Q9HBL6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.89■□□□□ 0.46
LRTM1Q9HBL6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 AL133373.2-201ENST00000623187 2828 ntBASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 FAM197Y1-201ENST00000421178 764 ntBASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms