Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 HOXB1-202ENST00000577092 1414 ntBASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 HCG11-201ENST00000411553 5696 ntBASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
ZFYVE1Q9HBF4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 RCN1P1-201ENST00000400413 996 ntBASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 KRT18P41-201ENST00000518924 1277 ntBASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 AC112497.1-201ENST00000624824 639 ntBASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZFYVE1Q9HBF4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 AC112777.1-201ENST00000540175 1423 ntBASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 COX11P1-201ENST00000489116 835 ntBASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 MYC-208ENST00000641036 567 ntBASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 AL499627.1-201ENST00000569373 2188 ntBASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.61■□□□□ 0.57
ZFYVE1Q9HBF4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 AC140113.3-201ENST00000605663 199 ntBASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 AL031432.5-201ENST00000641059 760 ntBASIC18.6■□□□□ 0.57
ZFYVE1Q9HBF4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms