Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 KRT8P10-201ENST00000450021 1447 ntBASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 AC009065.1-201ENST00000564055 1225 ntBASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 AC138894.3-201ENST00000603787 634 ntBASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 AL592071.1-201ENST00000611956 408 ntBASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPAP3Q9H6T3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 AC124864.1-201ENST00000623408 392 ntBASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RPAP3Q9H6T3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPAP3Q9H6T3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.39■■□□□ 1.02
RPAP3Q9H6T3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RPAP3Q9H6T3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 AL031008.1-201ENST00000619963 541 ntBASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RPAP3Q9H6T3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 AC009078.2-202ENST00000463353 338 ntBASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 RN7SL606P-201ENST00000472779 293 ntBASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 Z69720.1-201ENST00000601483 472 ntBASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RPAP3Q9H6T3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 AL353692.3-201ENST00000407031 1396 ntBASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 GUSBP12-201ENST00000513727 720 ntBASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 LINC01711-201ENST00000598340 967 ntBASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 AC099336.1-202ENST00000602961 463 ntBASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.37■■□□□ 1.01
RPAP3Q9H6T3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP3Q9H6T3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP3Q9H6T3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RPAP3Q9H6T3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RPAP3Q9H6T3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms