Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VPS11Q9H270 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 HEIH-201ENST00000623091 1652 ntBASIC18.74■□□□□ 0.59
VPS11Q9H270 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS11Q9H270 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.74■□□□□ 0.59
VPS11Q9H270 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS11Q9H270 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.74■□□□□ 0.59
VPS11Q9H270 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.74■□□□□ 0.59
VPS11Q9H270 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS11Q9H270 AP003097.1-201ENST00000530657 1135 ntBASIC18.74■□□□□ 0.59
VPS11Q9H270 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS11Q9H270 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS11Q9H270 AC069544.1-201ENST00000609399 999 ntBASIC18.74■□□□□ 0.59
VPS11Q9H270 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS11Q9H270 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VPS11Q9H270 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS11Q9H270 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VPS11Q9H270 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS11Q9H270 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS11Q9H270 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
VPS11Q9H270 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS11Q9H270 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS11Q9H270 RCC2P6-201ENST00000526625 1557 ntBASIC18.73■□□□□ 0.59
VPS11Q9H270 OR6D1P-202ENST00000641007 5290 ntBASIC18.73■□□□□ 0.59
VPS11Q9H270 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS11Q9H270 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
VPS11Q9H270 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.73■□□□□ 0.59
VPS11Q9H270 RNA5SP413-201ENST00000516373 109 ntBASIC18.73■□□□□ 0.59
VPS11Q9H270 AC090192.1-201ENST00000517740 490 ntBASIC18.73■□□□□ 0.59
VPS11Q9H270 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS11Q9H270 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.73■□□□□ 0.59
VPS11Q9H270 AC233263.1-201ENST00000578059 224 ntBASIC18.73■□□□□ 0.59
VPS11Q9H270 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS11Q9H270 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS11Q9H270 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VPS11Q9H270 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS11Q9H270 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS11Q9H270 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
VPS11Q9H270 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
VPS11Q9H270 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VPS11Q9H270 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VPS11Q9H270 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VPS11Q9H270 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VPS11Q9H270 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VPS11Q9H270 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS11Q9H270 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
VPS11Q9H270 AL023875.1-201ENST00000640777 796 ntBASIC18.72■□□□□ 0.59
VPS11Q9H270 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 FZD10-202ENST00000539839 3282 ntBASIC18.72■□□□□ 0.59
VPS11Q9H270 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VPS11Q9H270 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS11Q9H270 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
VPS11Q9H270 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS11Q9H270 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
VPS11Q9H270 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS11Q9H270 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS11Q9H270 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms