Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 BNIP3P18-201ENST00000593976 575 ntBASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 AL773604.1-201ENST00000617417 272 ntBASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.6■■□□□ 1.21
RTFDC1Q9BY42 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 AC009065.1-201ENST00000564055 1225 ntBASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 AC011840.4-201ENST00000578471 627 ntBASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 AC139530.3-201ENST00000620344 690 ntBASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.59■■□□□ 1.21
RTFDC1Q9BY42 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RTFDC1Q9BY42 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RTFDC1Q9BY42 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTFDC1Q9BY42 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTFDC1Q9BY42 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTFDC1Q9BY42 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTFDC1Q9BY42 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 FAM197Y8-203ENST00000450145 560 ntBASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 MINOS1P3-201ENST00000457048 203 ntBASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 MIR5100-201ENST00000579544 119 ntBASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTFDC1Q9BY42 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 KRT18P67-201ENST00000432816 1264 ntBASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 SLC25A1P1-201ENST00000528351 927 ntBASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 KRT8P50-201ENST00000562022 1438 ntBASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 FP475955.4-201ENST00000623131 1990 ntBASIC22.56■■□□□ 1.2
RTFDC1Q9BY42 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 AL031284.1-201ENST00000419297 478 ntBASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.55■■□□□ 1.2
RTFDC1Q9BY42 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms