Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A2Q9BY10 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 TSPY19P-201ENST00000418461 509 ntBASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 TSPY18P-201ENST00000441642 509 ntBASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 KRT18P41-201ENST00000518924 1277 ntBASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 AC111152.3-201ENST00000569699 673 ntBASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A2Q9BY10 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 AC009065.1-201ENST00000564055 1225 ntBASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 AC012615.1-201ENST00000565797 1299 ntBASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 AL732292.2-201ENST00000609649 430 ntBASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC46A2Q9BY10 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 AL163051.1-201ENST00000569214 1512 ntBASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 AC246785.2-201ENST00000432512 513 ntBASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC46A2Q9BY10 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 AC005332.7-201ENST00000614046 2005 ntBASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 RN7SL606P-201ENST00000472779 293 ntBASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 FOSL1P1-201ENST00000511041 816 ntBASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC46A2Q9BY10 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms