Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SHANK2-AS3Q9BTD1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC004951.3-201ENST00000418645 1148 ntBASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 HLA-L-209ENST00000420110 1011 ntBASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC091390.4-202ENST00000476426 537 ntBASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 KSR1P1-201ENST00000446298 240 ntBASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 RCC2P3-201ENST00000418112 1537 ntBASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC135776.1-201ENST00000319817 2481 ntBASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SHANK2-AS3Q9BTD1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHANK2-AS3Q9BTD1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHANK2-AS3Q9BTD1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHANK2-AS3Q9BTD1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SHANK2-AS3Q9BTD1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHANK2-AS3Q9BTD1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SHANK2-AS3Q9BTD1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 RN7SL471P-201ENST00000580476 299 ntBASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 AC008764.6-201ENST00000595909 2069 ntBASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SHANK2-AS3Q9BTD1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms