Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 KRT18P41-201ENST00000518924 1277 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 RN7SL850P-201ENST00000579959 291 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 AC140113.3-201ENST00000605663 199 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 AC112497.1-201ENST00000624824 639 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 MYC-208ENST00000641036 567 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 AC112777.1-201ENST00000540175 1423 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 HOXB1-202ENST00000577092 1414 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCM2Q9BSQ5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCM2Q9BSQ5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 AP000593.1-201ENST00000393668 712 ntBASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCM2Q9BSQ5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms