Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 AL499627.1-201ENST00000569373 2188 ntBASIC14.14□□□□□ -0.15
VGLL1Q99990 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VGLL1Q99990 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.13□□□□□ -0.15
VGLL1Q99990 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.13□□□□□ -0.15
VGLL1Q99990 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.13□□□□□ -0.15
VGLL1Q99990 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.13□□□□□ -0.15
VGLL1Q99990 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.13□□□□□ -0.15
VGLL1Q99990 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.13□□□□□ -0.15
VGLL1Q99990 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.13□□□□□ -0.15
VGLL1Q99990 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.13□□□□□ -0.15
VGLL1Q99990 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.13□□□□□ -0.15
VGLL1Q99990 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.13□□□□□ -0.15
VGLL1Q99990 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VGLL1Q99990 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.13□□□□□ -0.15
VGLL1Q99990 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.13□□□□□ -0.15
VGLL1Q99990 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.13□□□□□ -0.15
VGLL1Q99990 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.13□□□□□ -0.15
VGLL1Q99990 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
VGLL1Q99990 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
VGLL1Q99990 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VGLL1Q99990 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VGLL1Q99990 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.12□□□□□ -0.15
VGLL1Q99990 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VGLL1Q99990 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.12□□□□□ -0.15
VGLL1Q99990 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.12□□□□□ -0.15
VGLL1Q99990 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
VGLL1Q99990 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VGLL1Q99990 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
VGLL1Q99990 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.12□□□□□ -0.15
VGLL1Q99990 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.12□□□□□ -0.15
VGLL1Q99990 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.12□□□□□ -0.15
VGLL1Q99990 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VGLL1Q99990 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.12□□□□□ -0.15
VGLL1Q99990 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.12□□□□□ -0.15
VGLL1Q99990 UNC93B5-201ENST00000530315 699 ntBASIC14.12□□□□□ -0.15
VGLL1Q99990 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VGLL1Q99990 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.12□□□□□ -0.15
VGLL1Q99990 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VGLL1Q99990 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VGLL1Q99990 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VGLL1Q99990 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.11□□□□□ -0.15
VGLL1Q99990 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.11□□□□□ -0.15
VGLL1Q99990 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.11□□□□□ -0.15
VGLL1Q99990 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VGLL1Q99990 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms