Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC113404.2-201ENST00000507884 177 ntBASIC19.16■□□□□ 0.66
NOTCH4Q99466 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 AL662844.1-201ENST00000546340 181 ntBASIC19.16■□□□□ 0.66
NOTCH4Q99466 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 AC093484.2-201ENST00000580996 2166 ntBASIC19.16■□□□□ 0.66
NOTCH4Q99466 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH4Q99466 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH4Q99466 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH4Q99466 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NOTCH4Q99466 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH4Q99466 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH4Q99466 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 NUS1P2-201ENST00000417358 873 ntBASIC19.15■□□□□ 0.66
NOTCH4Q99466 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 VENTXP7-201ENST00000475503 772 ntBASIC19.15■□□□□ 0.66
NOTCH4Q99466 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 AL049812.1-201ENST00000432563 2267 ntBASIC19.15■□□□□ 0.66
NOTCH4Q99466 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH4Q99466 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.15■□□□□ 0.66
NOTCH4Q99466 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NOTCH4Q99466 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.14■□□□□ 0.66
NOTCH4Q99466 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NOTCH4Q99466 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
NOTCH4Q99466 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NOTCH4Q99466 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NOTCH4Q99466 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
NOTCH4Q99466 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.14■□□□□ 0.65
NOTCH4Q99466 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.14■□□□□ 0.65
NOTCH4Q99466 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.14■□□□□ 0.65
NOTCH4Q99466 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.14■□□□□ 0.65
NOTCH4Q99466 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NOTCH4Q99466 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH4Q99466 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 AL773604.1-201ENST00000617417 272 ntBASIC19.13■□□□□ 0.65
NOTCH4Q99466 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH4Q99466 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NOTCH4Q99466 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms