Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 AC254562.1-201ENST00000417586 456 ntBASIC18.21■□□□□ 0.51
CFAP54Q96N23 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.21■□□□□ 0.51
CFAP54Q96N23 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 Z92544.3-201ENST00000624747 417 ntBASIC18.21■□□□□ 0.51
CFAP54Q96N23 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 AC092474.2-201ENST00000424288 719 ntBASIC18.21■□□□□ 0.51
CFAP54Q96N23 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CFAP54Q96N23 ALG1L5P-201ENST00000482043 771 ntBASIC18.21■□□□□ 0.51
CFAP54Q96N23 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CFAP54Q96N23 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.21■□□□□ 0.5
CFAP54Q96N23 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CFAP54Q96N23 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 AP005212.1-201ENST00000581547 1997 ntBASIC18.2■□□□□ 0.5
CFAP54Q96N23 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 RNA5SP416-201ENST00000516838 111 ntBASIC18.2■□□□□ 0.5
CFAP54Q96N23 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 AC005829.1-201ENST00000570002 483 ntBASIC18.2■□□□□ 0.5
CFAP54Q96N23 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 AC027612.4-201ENST00000605371 583 ntBASIC18.2■□□□□ 0.5
CFAP54Q96N23 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.2■□□□□ 0.5
CFAP54Q96N23 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CFAP54Q96N23 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 AL139400.1-201ENST00000366220 510 ntBASIC18.19■□□□□ 0.5
CFAP54Q96N23 POM121L3P-201ENST00000419331 1163 ntBASIC18.19■□□□□ 0.5
CFAP54Q96N23 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 AF228730.6-201ENST00000641497 218 ntBASIC18.19■□□□□ 0.5
CFAP54Q96N23 AC084121.3-201ENST00000641716 218 ntBASIC18.19■□□□□ 0.5
CFAP54Q96N23 AC105233.6-201ENST00000642093 218 ntBASIC18.19■□□□□ 0.5
CFAP54Q96N23 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 AC079834.2-201ENST00000609776 1949 ntBASIC18.19■□□□□ 0.5
CFAP54Q96N23 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CFAP54Q96N23 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms