Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 AC093787.1-201ENST00000450396 207 ntBASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 AL589743.5-201ENST00000616611 1050 ntBASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP6Q96FZ7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 KRT8P8-201ENST00000434750 1448 ntBASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 AC010980.2-201ENST00000587099 1412 ntBASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 AL499627.1-201ENST00000569373 2188 ntBASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 MIR663A-201ENST00000385250 93 ntBASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP6Q96FZ7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 AC026185.1-201ENST00000445748 174 ntBASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 AC105036.2-201ENST00000569468 176 ntBASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP6Q96FZ7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP6Q96FZ7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms