Protein–RNA interactions for Protein: Q96ES7

SGF29, SAGA-associated factor 29, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGF29Q96ES7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SGF29Q96ES7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SGF29Q96ES7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.83■□□□□ 0.6
SGF29Q96ES7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.83■□□□□ 0.6
SGF29Q96ES7 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.83■□□□□ 0.6
SGF29Q96ES7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.83■□□□□ 0.6
SGF29Q96ES7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.83■□□□□ 0.6
SGF29Q96ES7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SGF29Q96ES7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SGF29Q96ES7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SGF29Q96ES7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.83■□□□□ 0.6
SGF29Q96ES7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.82■□□□□ 0.6
SGF29Q96ES7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.82■□□□□ 0.6
SGF29Q96ES7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 AC113347.1-201ENST00000413321 391 ntBASIC18.82■□□□□ 0.6
SGF29Q96ES7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 MFAP1P1-201ENST00000442257 1255 ntBASIC18.82■□□□□ 0.6
SGF29Q96ES7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.82■□□□□ 0.6
SGF29Q96ES7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.82■□□□□ 0.6
SGF29Q96ES7 AL031598.1-201ENST00000561511 1773 ntBASIC18.82■□□□□ 0.6
SGF29Q96ES7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SGF29Q96ES7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 FEM1AP3-201ENST00000403722 1741 ntBASIC18.82■□□□□ 0.6
SGF29Q96ES7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
SGF29Q96ES7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SGF29Q96ES7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGF29Q96ES7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 AC096733.2-201ENST00000609937 1394 ntBASIC18.81■□□□□ 0.6
SGF29Q96ES7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 AL512353.2-201ENST00000448759 1962 ntBASIC18.81■□□□□ 0.6
SGF29Q96ES7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 PRSS44-201ENST00000515154 1146 ntBASIC18.81■□□□□ 0.6
SGF29Q96ES7 FITM1-202ENST00000559294 800 ntBASIC18.81■□□□□ 0.6
SGF29Q96ES7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SGF29Q96ES7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGF29Q96ES7 LINC01568-207ENST00000641790 1380 ntBASIC18.81■□□□□ 0.6
SGF29Q96ES7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 KRT8P9-201ENST00000558927 1449 ntBASIC18.8■□□□□ 0.6
SGF29Q96ES7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.8■□□□□ 0.6
SGF29Q96ES7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGF29Q96ES7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms