Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 BX276092.2-201ENST00000417668 665 ntBASIC18.35■□□□□ 0.53
SPDL1Q96EA4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.35■□□□□ 0.53
SPDL1Q96EA4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPDL1Q96EA4 AC080080.1-201ENST00000625121 2420 ntBASIC18.34■□□□□ 0.53
SPDL1Q96EA4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPDL1Q96EA4 AP006587.1-201ENST00000534129 1502 ntBASIC18.33■□□□□ 0.53
SPDL1Q96EA4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SPDL1Q96EA4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 YBX1P10-201ENST00000444752 975 ntBASIC18.33■□□□□ 0.52
SPDL1Q96EA4 RPS2P52-201ENST00000469610 820 ntBASIC18.33■□□□□ 0.52
SPDL1Q96EA4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 AC105036.2-201ENST00000569468 176 ntBASIC18.33■□□□□ 0.52
SPDL1Q96EA4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 AC006557.6-201ENST00000623071 864 ntBASIC18.33■□□□□ 0.52
SPDL1Q96EA4 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SPDL1Q96EA4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms