Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VPS33AQ96AX1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 Z85996.1-201ENST00000494644 937 ntBASIC17.9■□□□□ 0.46
VPS33AQ96AX1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 AC008403.3-201ENST00000598924 454 ntBASIC17.9■□□□□ 0.46
VPS33AQ96AX1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
VPS33AQ96AX1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS33AQ96AX1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VPS33AQ96AX1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
VPS33AQ96AX1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS33AQ96AX1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.89■□□□□ 0.46
VPS33AQ96AX1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.46
VPS33AQ96AX1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 AC008764.6-201ENST00000595909 2069 ntBASIC17.89■□□□□ 0.45
VPS33AQ96AX1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS33AQ96AX1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 POU5F1P3-201ENST00000428824 1078 ntBASIC17.88■□□□□ 0.45
VPS33AQ96AX1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 KRT8P11-201ENST00000409686 1436 ntBASIC17.88■□□□□ 0.45
VPS33AQ96AX1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms