Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6NLQ92738 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
USP6NLQ92738 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6NLQ92738 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.05■□□□□ 0.96
USP6NLQ92738 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP6NLQ92738 PMS2P1-201ENST00000431037 1228 ntBASIC21.05■□□□□ 0.96
USP6NLQ92738 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
USP6NLQ92738 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.05■□□□□ 0.96
USP6NLQ92738 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.05■□□□□ 0.96
USP6NLQ92738 AC064862.7-201ENST00000604520 867 ntBASIC21.05■□□□□ 0.96
USP6NLQ92738 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.05■□□□□ 0.96
USP6NLQ92738 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.05■□□□□ 0.96
USP6NLQ92738 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP6NLQ92738 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.05■□□□□ 0.96
USP6NLQ92738 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
USP6NLQ92738 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP6NLQ92738 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 NUS1P2-201ENST00000417358 873 ntBASIC21.04■□□□□ 0.96
USP6NLQ92738 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 AP001005.1-201ENST00000571755 1248 ntBASIC21.04■□□□□ 0.96
USP6NLQ92738 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.04■□□□□ 0.96
USP6NLQ92738 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 TREX1-205ENST00000625293 1783 ntBASIC21.04■□□□□ 0.96
USP6NLQ92738 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.04■□□□□ 0.96
USP6NLQ92738 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP6NLQ92738 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6NLQ92738 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6NLQ92738 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6NLQ92738 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
USP6NLQ92738 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.03■□□□□ 0.96
USP6NLQ92738 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6NLQ92738 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.03■□□□□ 0.96
USP6NLQ92738 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6NLQ92738 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP6NLQ92738 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP6NLQ92738 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6NLQ92738 POM121L3P-201ENST00000419331 1163 ntBASIC21.03■□□□□ 0.96
USP6NLQ92738 VENTXP7-201ENST00000475503 772 ntBASIC21.03■□□□□ 0.96
USP6NLQ92738 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6NLQ92738 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.03■□□□□ 0.96
USP6NLQ92738 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.03■□□□□ 0.96
USP6NLQ92738 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.03■□□□□ 0.96
USP6NLQ92738 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6NLQ92738 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
USP6NLQ92738 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
USP6NLQ92738 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6NLQ92738 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP6NLQ92738 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP6NLQ92738 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
USP6NLQ92738 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
USP6NLQ92738 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.02■□□□□ 0.96
USP6NLQ92738 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.02■□□□□ 0.96
USP6NLQ92738 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.02■□□□□ 0.96
USP6NLQ92738 SLC25A1P1-201ENST00000528351 927 ntBASIC21.02■□□□□ 0.96
USP6NLQ92738 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.02■□□□□ 0.96
USP6NLQ92738 BNIP3P18-201ENST00000593976 575 ntBASIC21.02■□□□□ 0.96
USP6NLQ92738 AL773604.1-201ENST00000617417 272 ntBASIC21.02■□□□□ 0.96
USP6NLQ92738 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6NLQ92738 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
USP6NLQ92738 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.02■□□□□ 0.96
USP6NLQ92738 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
USP6NLQ92738 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.02■□□□□ 0.95
USP6NLQ92738 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.02■□□□□ 0.95
USP6NLQ92738 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP6NLQ92738 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP6NLQ92738 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP6NLQ92738 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6NLQ92738 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6NLQ92738 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.01■□□□□ 0.95
USP6NLQ92738 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP6NLQ92738 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6NLQ92738 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.01■□□□□ 0.95
USP6NLQ92738 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP6NLQ92738 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms