Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 AC116562.2-201ENST00000507042 360 ntBASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF3IP1Q8TDR0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 AC096733.2-201ENST00000609937 1394 ntBASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAF3IP1Q8TDR0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 MIR718-201ENST00000390190 70 ntBASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 AC097488.1-201ENST00000507834 756 ntBASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 MYC-208ENST00000641036 567 ntBASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 AC126763.1-201ENST00000552015 2118 ntBASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP1Q8TDR0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAF3IP1Q8TDR0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRAF3IP1Q8TDR0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRAF3IP1Q8TDR0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRAF3IP1Q8TDR0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms