Protein–RNA interactions for Protein: Q8TA94

ZNF563, Zinc finger protein 563, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563Q8TA94 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 AL138781.2-201ENST00000617896 1843 ntBASIC17.12■□□□□ 0.33
ZNF563Q8TA94 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 MIR1238-201ENST00000408483 83 ntBASIC17.12■□□□□ 0.33
ZNF563Q8TA94 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 AL355075.4-201ENST00000554988 638 ntBASIC17.12■□□□□ 0.33
ZNF563Q8TA94 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 AC068587.9-201ENST00000641814 219 ntBASIC17.12■□□□□ 0.33
ZNF563Q8TA94 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF563Q8TA94 AC079598.2-202ENST00000546624 1451 ntBASIC17.12■□□□□ 0.33
ZNF563Q8TA94 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 AL390955.1-201ENST00000428694 934 ntBASIC17.11■□□□□ 0.33
ZNF563Q8TA94 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 CA15P1-201ENST00000481698 905 ntBASIC17.11■□□□□ 0.33
ZNF563Q8TA94 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF563Q8TA94 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.1■□□□□ 0.33
ZNF563Q8TA94 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 AC066615.1-201ENST00000640911 628 ntBASIC17.1■□□□□ 0.33
ZNF563Q8TA94 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.1■□□□□ 0.33
ZNF563Q8TA94 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF563Q8TA94 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.09■□□□□ 0.33
ZNF563Q8TA94 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 FITM1-202ENST00000559294 800 ntBASIC17.09■□□□□ 0.33
ZNF563Q8TA94 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF563Q8TA94 WIZP1-201ENST00000531444 2299 ntBASIC17.09■□□□□ 0.33
ZNF563Q8TA94 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms