Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
C3orf56Q8N813 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C3orf56Q8N813 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.54□□□□□ -0.08
C3orf56Q8N813 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
C3orf56Q8N813 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
C3orf56Q8N813 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
C3orf56Q8N813 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
C3orf56Q8N813 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 KRT8P7-201ENST00000533003 1432 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 HMGN1P19-201ENST00000436976 333 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AC073648.2-201ENST00000510116 352 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AL591684.3-201ENST00000605187 298 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 LINC02084-201ENST00000606069 1096 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 AL355385.1-201ENST00000606123 409 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 AC010240.3-201ENST00000607688 395 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
C3orf56Q8N813 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.53□□□□□ -0.08
C3orf56Q8N813 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C3orf56Q8N813 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
C3orf56Q8N813 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
C3orf56Q8N813 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C3orf56Q8N813 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
C3orf56Q8N813 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 RPS2P28-201ENST00000314255 741 ntBASIC14.52□□□□□ -0.09
C3orf56Q8N813 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.52□□□□□ -0.09
C3orf56Q8N813 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 POM121L3P-201ENST00000419331 1163 ntBASIC14.52□□□□□ -0.09
C3orf56Q8N813 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.52□□□□□ -0.09
C3orf56Q8N813 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.52□□□□□ -0.09
C3orf56Q8N813 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.52□□□□□ -0.09
C3orf56Q8N813 AC009065.1-201ENST00000564055 1225 ntBASIC14.52□□□□□ -0.09
C3orf56Q8N813 AC139887.3-201ENST00000568585 713 ntBASIC14.52□□□□□ -0.09
C3orf56Q8N813 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.52□□□□□ -0.09
C3orf56Q8N813 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.52□□□□□ -0.09
C3orf56Q8N813 AC083906.6-201ENST00000641366 219 ntBASIC14.52□□□□□ -0.09
C3orf56Q8N813 AC079781.4-201ENST00000641908 219 ntBASIC14.52□□□□□ -0.09
C3orf56Q8N813 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.52□□□□□ -0.09
C3orf56Q8N813 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
C3orf56Q8N813 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C3orf56Q8N813 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
C3orf56Q8N813 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
C3orf56Q8N813 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
C3orf56Q8N813 MIR564-202ENST00000385049 94 ntBASIC14.51□□□□□ -0.09
C3orf56Q8N813 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C3orf56Q8N813 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms